The detailed information of tRNA gene sequence


Sequence ID>WENV181226128
Genome IDOFDK01000075
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 21433
End posion on genome 21523
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaaatgc
tRNA gene sequence 
GGAAGGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACCCGCTTACGCGG
GCCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
ttaatttttt
Secondary structure (Cloverleaf model)
>WENV181226128	Ser	TGA
                   c      GCCA ttaatttttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACCCGCTTACGCGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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