The detailed information of tRNA gene sequence


Sequence ID>WENV181226140
Genome IDOFDK01000088
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 3059
End posion on genome 3149
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagcttccca
tRNA gene sequence 
GGAGAGGTGGCCGAGGGGTCTAAGGCACACGCCTGGAGAGCGTGCGGTGGTCACAAACCA
CCCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaaggtgtta
Secondary structure (Cloverleaf model)
>WENV181226140	Ser	GGA
                   a      GCCA gaaggtgtta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      G G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        A     CGGTGGTCACAAACCACCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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