The detailed information of tRNA gene sequence


Sequence ID>WENV181226177
Genome IDOFDK01000173
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 9126
End posion on genome 9035
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgagccatgc
tRNA gene sequence 
GGAGAAGTACTCAAGTGGTGAAGAGGCGCCCCTGCTAAGGGCGTAGGTCGGGTAAAACCG
GCGCGAGGGTTCGAGTCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
gtagtgaacg
Secondary structure (Cloverleaf model)
>WENV181226177	Ser	GCT
                   c      GCCA gtagtgaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      G A          G     TAGGTCGGGTAAAACCGGCGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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