The detailed information of tRNA gene sequence


Sequence ID>WENV181227764
Genome IDOFDN01040787
Search identical group
Phylum/Class[OFDN] hot springs metagenome; Water
Species
Start position on genome 1176
End posion on genome 1084
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttttactt
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTCTATTGCGTTAGATTGCTAATCTATTGTATAACTACTAAAC
TTTATACCGAGGGTTCAAATCCCTCTCTCTCCTaga
Downstream region at tRNA end position 
aaaaattcag
Secondary structure (Cloverleaf model)
>WENV181227764	Ser	GCT
                   t      Taga aaaaattcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C T A        G     TGTATAACTACTAAACTTTATACC
                    T   T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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