The detailed information of tRNA gene sequence


Sequence ID>WENV181228576
Genome IDOFEH01000281
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1032
End posion on genome 1108
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggggcggagc
tRNA gene sequence 
AGCGGGGTAGGGCAGCCTGGTAGCCCGCGGGGCTCATAACCCCGAGGTCGGTGGTTCAAA
TCCACCCCCCGCTACCA
Downstream region at tRNA end position 
ccccttgcct
Secondary structure (Cloverleaf model)
>WENV181228576	fMet	CAT
                   c      ACCA ccccttgcct
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    C       C G G G       G G T G G     C
    T       | | | |                 T T
    G       G C C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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