The detailed information of tRNA gene sequence


Sequence ID>WENV181228583
Genome IDOFEH01000317
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 546
End posion on genome 472
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaaatcttat
tRNA gene sequence 
TGCGAGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCTCGCAACtt
Downstream region at tRNA end position 
aacttttgat
Secondary structure (Cloverleaf model)
>WENV181228583	fMet	CAT
                   t      ACtt aacttttgat
                     T - A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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