The detailed information of tRNA gene sequence


Sequence ID>WENV181228622
Genome IDOFEH01000507
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 2795
End posion on genome 2708
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atattttcta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGGTGACTCGAAATCACTTGTGGGTTTAAAGCCC
ACCGAGGGTTCGAATCCCTCCCTCTCCGtat
Downstream region at tRNA end position 
gtgatacttt
Secondary structure (Cloverleaf model)
>WENV181228622	Ser	CGA
                   a      Gtat gtgatacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTGGGTTTAAAGCCCACC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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