The detailed information of tRNA gene sequence


Sequence ID>WENV181228625
Genome IDOFEH01000513
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 11830
End posion on genome 11757
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggtaaaata
tRNA gene sequence 
GGGGCACTAGCTCAATTGGCAGAGCGCGGGACTCCAAATTCCGCGGTTGGGGGTTCGACT
CCTCCGTGCCCCGCtc
Downstream region at tRNA end position 
ttacgatgag
Secondary structure (Cloverleaf model)
>WENV181228625	Trp	CCA
                   a      GCtc ttacgatgag
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G          T C
                    T     C C T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     CGGTT
                    C - G
                    G - C
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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