The detailed information of tRNA gene sequence


Sequence ID>WENV181228627
Genome IDOFEH01000519
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 9161
End posion on genome 9235
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggggtagggc
tRNA gene sequence 
AGCGGGGTAGGGCAGCCTGGTAGCCCGCGGGGCTCATAACCCCGAGGTCGGTGGTTCAAA
TCCACCCCCCGCTACta
Downstream region at tRNA end position 
ccctcgcccg
Secondary structure (Cloverleaf model)
>WENV181228627	fMet	CAT
                   c      ACta ccctcgcccg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    C       C G G G       G G T G G     C
    T       | | | |                 T T
    G       G C C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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