The detailed information of tRNA gene sequence


Sequence ID>WENV181228630
Genome IDOFEH01000547
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 11346
End posion on genome 11420
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tggccccagt
tRNA gene sequence 
GGGCCGGTAGCTCAGCTGGAAGAGCGCTCGGTTGGCATCCGAGAGGTCCCGGGTTCAAGT
CCCGGCCGGTCCACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181228630	Ala	GGC
                   t      ACCn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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