The detailed information of tRNA gene sequence


Sequence ID>WENV181228704
Genome IDOFEH01001369
Search identical group
Phylum/Class[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1787
End posion on genome 1858
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgcgtattaa
tRNA gene sequence 
GGGGATGTAGCTCAGCGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGTGGGTTCAAATC
CCACCATCTCCAtgt
Downstream region at tRNA end position 
gtaaaacgtg
Secondary structure (Cloverleaf model)
>WENV181228704	Ala	TGC
                   a      Atgt gtaaaacgtg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     A
      C     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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