The detailed information of tRNA gene sequence


Sequence ID>WENV181229366
Genome IDOFEJ01006354
Search identical group
Phylum/Class[OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 2405
End posion on genome 2332
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnggc
tRNA gene sequence 
AGCGGGGTAGGGCAGCCTGGTAGCCCGCGGGGCTCATAACCCCGAGGTCGGTGGTTCAAA
TCCACCCCCCGCTAtta
Downstream region at tRNA end position 
ccctcgcccg
Secondary structure (Cloverleaf model)
>WENV181229366	fMet	CAT
                   c      Atta ccctcgcccg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    C       C G G G       G G T G G     C
    T       | | | |                 T T
    G       G C C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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