The detailed information of tRNA gene sequence


Sequence ID>WENV181229489
Genome IDOFEJ01020041
Search identical group
Phylum/Class[OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 899
End posion on genome 823
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
AGCGGGGTAGGCCAGCCTGGTAGGCCGCGGGGCTCATAACCCCGAGGTCCCCGGTTCAAA
TCCGGGCCCCGCTACCA
Downstream region at tRNA end position 
tcctcggccg
Secondary structure (Cloverleaf model)
>WENV181229489	fMet	CAT
                   n      ACCA tcctcggccg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       C C G G       C C C G G     C
    T       | | | |                 T T
    G       G G C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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