The detailed information of tRNA gene sequence


Sequence ID>WENV181230919
Genome IDOFEK01005374
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 2109
End posion on genome 2185
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacaattctc
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTCAGAGCGCCCGGCTCATAACCGGGCGGTCGTGGGTTCGA
ATCCCTCCGGGCCCACCt
Downstream region at tRNA end position 
ttaatcgggg
Secondary structure (Cloverleaf model)
>WENV181230919	Met	CAT
                   c      ACCt ttaatcgggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      |   | | |     G
  C         T T C G       G T G G G     C
  G         + | | |                 T T
  G         G A G C
    T C A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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