The detailed information of tRNA gene sequence


Sequence ID>WENV181368606
Genome IDOFQM01002230
Search identical group
Phylum/Class[OFQM] freshwater metagenome; Freshwater Lake
Species
Start position on genome 446
End posion on genome 357
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagtgctagT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGACTGGAAATCGTGTAGGCGCTAAAACCGC
CTCGAGGGTTCAAATCCCTCTCTCTCCGTta
Downstream region at tRNA end position 
ttgctatata
Secondary structure (Cloverleaf model)
>WENV181368606	Ser	GGA
                   T      GTta ttgctatata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAGGCGCTAAAACCGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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