The detailed information of tRNA gene sequence


Sequence ID>WENV181370933
Genome IDOFQU01000977
Search identical group
Phylum/Class[OFQU] wastewater metagenome; Exp Tend CN 90WW
Species
Start position on genome 4648
End posion on genome 4743
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctgagttcaa
tRNA gene sequence 
GGAAGGCAATCGCGCCCGGTGGCGCGGCCGGGCTTCAAACCCGGTTGGGGACGGCATCCG
TTCCCGGGCAGGTTCGACTCCGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tttccctgac
Secondary structure (Cloverleaf model)
>WENV181370933	SeC	TCA
                   a      GCCA tttccctgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    A     C G G C C     A
      C C C        T      | |   | |     G
    G       G C G C       G C A G G     C
    G       | | | |                 T T
    T       C G C G
      G G          G     TTGGGGACGGCATCCGTTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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