The detailed information of tRNA gene sequence


Sequence ID>WENV181371830
Genome IDOFQW01001128
Search identical group
Phylum/Class[OFQW] wastewater metagenome; Exp Tend NO 90WW
Species
Start position on genome 2670
End posion on genome 2582
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgccgacgc
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGTTGAAGGTGCCGCTCTCGAAAAGCGGTGTGCGGTTCCCGTAC
CGGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
ggagaaggcc
Secondary structure (Cloverleaf model)
>WENV181371830	Ser	CGA
                   c      GCCA ggagaaggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G T C T       G G G A G     C
    G         + |                   T T
    T       A G G T
      T G A        G     TGTGCGGTTCCCGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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