The detailed information of tRNA gene sequence


Sequence ID>WENV181372198
Genome IDOFQW01027651
Search identical group
Phylum/Class[OFQW] wastewater metagenome; Exp Tend NO 90WW
Species
Start position on genome 360
End posion on genome 269
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcttcgacga
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCTAGTGCGCTACACTCGAAATGTAGTATAGGGGCAACCC
TATCGGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
aataaagaga
Secondary structure (Cloverleaf model)
>WENV181372198	Ser	CGA
                   a      GCCA aataaagaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    C T G A        C      | | | | |     G
  C         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TATAGGGGCAACCCTATC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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