The detailed information of tRNA gene sequence


Sequence ID>WENV181379846
Genome IDOFRD01011719
Search identical group
Phylum/Class[OFRD] wastewater metagenome; Exp Tend CN 100WW
Species
Start position on genome 989
End posion on genome 1084
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctgagttcaa
tRNA gene sequence 
GGAAGGCAATCGCGCCCGGTGGCGCGGCCGGGCTTCAAACCCGGTTGGGGACGGCATCCG
TTCCCGGGCAGGTTCGACTCCGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tttcaatcaa
Secondary structure (Cloverleaf model)
>WENV181379846	SeC	TCA
                   a      GCCA tttcaatcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    A     C G G C C     A
      C C C        T      | |   | |     G
    G       G C G C       G C A G G     C
    G       | | | |                 T T
    T       C G C G
      G G          G     TTGGGGACGGCATCCGTTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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