The detailed information of tRNA gene sequence


Sequence ID>WENV181380217
Genome IDOFRD01042461
Search identical group
Phylum/Class[OFRD] wastewater metagenome; Exp Tend CN 100WW
Species
Start position on genome 450
End posion on genome 361
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttgttcaa
tRNA gene sequence 
GGAGACGTCGCATAGCCCGGTCGAGTGCGCCTCACTGCTAACGAGGTAAGGTGTTAAAGC
CTTCAGGAGTTCAAATCTCCTCGTCTCCGCag
Downstream region at tRNA end position 
attaaagata
Secondary structure (Cloverleaf model)
>WENV181380217	Ser	GCT
                   a      GCag attaaagata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C T C     A
    C C G A        C      | | | | |     A
  C         T A C G       A G G A G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAAGGTGTTAAAGCCTTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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