The detailed information of tRNA gene sequence


Sequence ID>WENV181381920
Genome IDOFRF01027790
Search identical group
Phylum/Class[OFRF] wastewater metagenome; Exp Tend CN 50WW
Species
Start position on genome 388
End posion on genome 297
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccttgtactc
tRNA gene sequence 
GGAGACGTCGCATAGCCCGGTCGAGTGCGCCTCACTGCTAACGAGGTAAGGGGTTAAACC
CTTCAGGAGTTCAAATCTCCTCGTCTCCGCCA
Downstream region at tRNA end position 
gaagaatgat
Secondary structure (Cloverleaf model)
>WENV181381920	Ser	GCT
                   c      GCCA gaagaatgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C T C     A
    C C G A        C      | | | | |     A
  C         T A C G       A G G A G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAAGGGGTTAAACCCTTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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