The detailed information of tRNA gene sequence


Sequence ID>WENV181384327
Genome IDOFRI01000185
Search identical group
Phylum/Class[OFRI] wastewater metagenome; Exp Tend VB 90WW
Species
Start position on genome 2882
End posion on genome 2971
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcggcggcaa
tRNA gene sequence 
GGAAGTGTGGCCGAGTGGTTTAAGGCACTGGTCTTGAAAACCAGCGACGGTGAGAGCCGT
CCGTGGGTTCGAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
cttacgctcg
Secondary structure (Cloverleaf model)
>WENV181384327	Ser	TGA
                   a      GCCA cttacgctcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGACGGTGAGAGCCGTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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