The detailed information of tRNA gene sequence


Sequence ID>WENV181384388
Genome IDOFRI01000532
Search identical group
Phylum/Class[OFRI] wastewater metagenome; Exp Tend VB 90WW
Species
Start position on genome 5528
End posion on genome 5437
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccctcgca
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAATCGTCGTACCCCGTAAGGGG
TACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ttcctctcag
Secondary structure (Cloverleaf model)
>WENV181384388	Ser	GCT
                   a      GCCA ttcctctcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACCCCGTAAGGGGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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