The detailed information of tRNA gene sequence


Sequence ID>WENV181384575
Genome IDOFRI01003023
Search identical group
Phylum/Class[OFRI] wastewater metagenome; Exp Tend VB 90WW
Species
Start position on genome 733
End posion on genome 638
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgtactttc
tRNA gene sequence 
GGAAGGCATGCGCATCCGGGCATGCGGCTGGGCTTCAAACCCAGTAGGGGGCGTCGATCG
TTCCCTGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
ttcgtgtttc
Secondary structure (Cloverleaf model)
>WENV181384575	SeC	TCA
                   c      GCCA ttcgtgtttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        G      | + | | |     G
    G       A C G C       G T A G G     C
    G       | | | |                 T T
    G       T G C G
      C A          G     TAGGGGGCGTCGATCGTTCCCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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