The detailed information of tRNA gene sequence


Sequence ID>WENV181404407
Genome IDOGCA01002009
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 266
End posion on genome 182
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cataatatga
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGTCTAAGGGGCTGGCCTTGAGAGCCAGTGGGCACAAGCCCGCG
CGGGTTCAAATCCCGCCCCCGGCGCtc
Downstream region at tRNA end position 
ccccctttaa
Secondary structure (Cloverleaf model)
>WENV181404407	Ser	TGA
                   a      GCtc ccccctttaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    T       A G G G
      C T A        G     TGGGCACAAGCCCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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