The detailed information of tRNA gene sequence


Sequence ID>WENV181404442
Genome IDOGCA01004127
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1124
End posion on genome 1051
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atttattata
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCAAA
TCCCGCCCCCGCAAtac
Downstream region at tRNA end position 
ttaaccacaa
Secondary structure (Cloverleaf model)
>WENV181404442	fMet	CAT
                   a      Atac ttaaccacaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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