The detailed information of tRNA gene sequence


Sequence ID>WENV181404496
Genome IDOGCA01007284
Search identical group
Phylum/Class[OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 301
End posion on genome 208
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgaaatctT
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTCGAAGGCGCTCGCCTGCTAAGCGAGTGCACGGGTTAAAAGC
CCGTGCCGCGGGTTCGAATCCCGCCTCCTCCGTtt
Downstream region at tRNA end position 
gagatataga
Secondary structure (Cloverleaf model)
>WENV181404496	Ser	GCT
                   T      GTtt gagatataga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGCACGGGTTAAAAGCCCGTGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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