The detailed information of tRNA gene sequence


Sequence ID>WENV181404629
Genome IDOGCB01000005
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 277
End posion on genome 184
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttggcgcct
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCTGAAGGGACACGACTGGAAATCGTGTAGGCGGGCTTAAACC
CGCCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaccgccccc
Secondary structure (Cloverleaf model)
>WENV181404629	Ser	GGA
                   t      GCCA aaccgccccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     TAGGCGGGCTTAAACCCGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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