The detailed information of tRNA gene sequence


Sequence ID>WENV181404678
Genome IDOGCB01000036
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 18546
End posion on genome 18470
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gacaacccga
tRNA gene sequence 
GGCCCCGTGGTGTAGTTGGTTAACACACCCGCCTGTCACGTGGGAGATCGCGGGTTCGAG
TCCCGTCGGGGCCGCCA
Downstream region at tRNA end position 
cgccgaggta
Secondary structure (Cloverleaf model)
>WENV181404678	Asp	GTC
                   a      GCCA cgccgaggta
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    T       T G T G       G C G G G     C
    G       | | | |                 T T
    G       A C A C
      T T A        A     AGATC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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