The detailed information of tRNA gene sequence


Sequence ID>WENV181404765
Genome IDOGCB01000171
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 7165
End posion on genome 7092
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggggcagaac
tRNA gene sequence 
AGCGGGGTAGGGCAGCCAGGTAGCCCGCGGGGCTCATAACCCCGAGGTCGGTGGTTCAAA
TCCACCCCCCGCTAtca
Downstream region at tRNA end position 
gatccccgcc
Secondary structure (Cloverleaf model)
>WENV181404765	fMet	CAT
                   c      Atca gatccccgcc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    C       C G G G       G G T G G     C
    A       | | | |                 T T
    G       G C C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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