The detailed information of tRNA gene sequence


Sequence ID>WENV181404809
Genome IDOGCB01000349
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1001
End posion on genome 925
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tggcatatgt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGTGGAGCGGCGGGCTCTTAACCCGTAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
caatgccggg
Secondary structure (Cloverleaf model)
>WENV181404809	Lys	CTT
                   t      GCCA caatgccggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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