The detailed information of tRNA gene sequence


Sequence ID>WENV181404841
Genome IDOGCB01000601
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 2569
End posion on genome 2494
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cccttcgctc
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGACAGAGCAGCCGCCTTCTAAGCGGTAGGTCGGGGGTTCGAAT
CCCTCCGGGCCCGCCA
Downstream region at tRNA end position 
cgatggggac
Secondary structure (Cloverleaf model)
>WENV181404841	Arg	TCT
                   c      GCCA cgatggggac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     AGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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