The detailed information of tRNA gene sequence


Sequence ID>WENV181404897
Genome IDOGCB01001354
Search identical group
Phylum/Class[OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 4801
End posion on genome 4726
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCCATCCCGCCGGGCTCATAACCCGGAGATCGGTGGTTCA
AATCCACCCCCCGCTAgat
Downstream region at tRNA end position 
agtatataag
Secondary structure (Cloverleaf model)
>WENV181404897	fMet	CAT
                   a      Agat agtatataag
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    T C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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