The detailed information of tRNA gene sequence


Sequence ID>WENV181405350
Genome IDOGCE01000010
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 38052
End posion on genome 37977
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggcgttgcct
tRNA gene sequence 
GGGGCCGTGGCGCAGTTGGGAGCGCGCCTCAATGGCATTGAGGAGGTCAGGGGTTCGAAT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
ggaaagcccc
Secondary structure (Cloverleaf model)
>WENV181405350	Ala	GGC
                   t      ACCA ggaaagcccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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