The detailed information of tRNA gene sequence


Sequence ID>WENV181405362
Genome IDOGCE01000025
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 16826
End posion on genome 16751
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tagggcgcgt
tRNA gene sequence 
GGGGCCGTGGCGCAGCTGGGAGCGCGCCTGAATCGCACTCAGGAGGTCACGGGTTCGAGT
CCCGTCGGCTCCACCA
Downstream region at tRNA end position 
aaagcccccc
Secondary structure (Cloverleaf model)
>WENV181405362	Ala	CGC
                   t      ACCA aaagcccccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A C G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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