The detailed information of tRNA gene sequence


Sequence ID>WENV181405399
Genome IDOGCE01000065
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 38167
End posion on genome 38260
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
actcaagcct
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCTGAAGGGACACGACTGGAAATCGTGTAGGCGGGCTTAAACC
CGCCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaccgccccc
Secondary structure (Cloverleaf model)
>WENV181405399	Ser	GGA
                   t      GCCA aaccgccccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     TAGGCGGGCTTAAACCCGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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