The detailed information of tRNA gene sequence


Sequence ID>WENV181405461
Genome IDOGCE01000145
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 15042
End posion on genome 14965
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gaatattgga
tRNA gene sequence 
GCCGCGGTAGTATAGCCAGGCCCAGTATGCGGGCCTCTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGCGGCACCA
Downstream region at tRNA end position 
tcagactgcg
Secondary structure (Cloverleaf model)
>WENV181405461	Glu	CTC
                   a      ACCA tcagactgcg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  A         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    C C C A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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