The detailed information of tRNA gene sequence


Sequence ID>WENV181405503
Genome IDOGCE01000212
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 20
End posion on genome 95
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
agacaaacaa
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGATAGGACGCCGCCCTGACGCGGCGGAGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACta
Downstream region at tRNA end position 
cccaatcact
Secondary structure (Cloverleaf model)
>WENV181405503	Val	GAC
                   a      ACta cccaatcact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    A T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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