The detailed information of tRNA gene sequence


Sequence ID>WENV181405522
Genome IDOGCE01000256
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 14137
End posion on genome 14062
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cccttcgctc
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGACAGAGCAGCCGCCTTCTAAGCGGTAGGTCGGGGGTTCGAAT
CCCTCCGGGCCCGCCA
Downstream region at tRNA end position 
ggatggggac
Secondary structure (Cloverleaf model)
>WENV181405522	Arg	TCT
                   c      GCCA ggatggggac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     AGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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