The detailed information of tRNA gene sequence


Sequence ID>WENV181405535
Genome IDOGCE01000291
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 3377
End posion on genome 3453
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aggatggcga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCAAA
TCCCGCCCCCGCAACCA
Downstream region at tRNA end position 
gaatcctgcc
Secondary structure (Cloverleaf model)
>WENV181405535	fMet	CAT
                   a      ACCA gaatcctgcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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