The detailed information of tRNA gene sequence


Sequence ID>WENV181405560
Genome IDOGCE01000367
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 17097
End posion on genome 17173
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
attatgtcgg
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCCATCCCGCCGGGCTCATAACCCGGAGATCGGTGGTTCA
AATCCACCCCCCGCTACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181405560	fMet	CAT
                   g      ACnn nnnnnnnnnn
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    T C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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