The detailed information of tRNA gene sequence


Sequence ID>WENV181405615
Genome IDOGCE01000597
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 572
End posion on genome 496
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttatagggt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGCGCTCGGTTGGCATCCGAGAGGTCCCGGGTTCAAA
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
aaccacctct
Secondary structure (Cloverleaf model)
>WENV181405615	Ala	GGC
                   t      ACCA aaccacctct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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