The detailed information of tRNA gene sequence


Sequence ID>WENV181405677
Genome IDOGCE01001169
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 8077
End posion on genome 8002
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCCATCCCGCCGGGCTCATAACCCGGAGATCGGTGGTTCA
AATCCACCCCCCGCTAata
Downstream region at tRNA end position 
ccctatataa
Secondary structure (Cloverleaf model)
>WENV181405677	fMet	CAT
                   a      Aata ccctatataa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    T C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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