The detailed information of tRNA gene sequence


Sequence ID>WENV181405683
Genome IDOGCE01001263
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 7548
End posion on genome 7623
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgaagttgaa
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCCATCCCGCCGGGCTCATAACCCGGAGATCGGTGGTTCA
AATCCACCCCCCGCTAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181405683	fMet	CAT
                   a      Annn nnnnnnnnnn
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    T C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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