The detailed information of tRNA gene sequence


Sequence ID>WENV181405876
Genome IDOGCE01007775
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 1851
End posion on genome 1775
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCTATCCCGCCGGGCTCATAACCCGGAGATCGGTGGTTCA
AATCCACCCCCCGCTACtt
Downstream region at tRNA end position 
ttatataaag
Secondary structure (Cloverleaf model)
>WENV181405876	fMet	CAT
                   a      ACtt ttatataaag
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    T C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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