The detailed information of tRNA gene sequence


Sequence ID>WENV181405951
Genome IDOGCE01014496
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 793
End posion on genome 717
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcggctcctt
tRNA gene sequence 
CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
cttgggtggt
Secondary structure (Cloverleaf model)
>WENV181405951	Pro	CGG
                   t      ACCA cttgggtggt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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