The detailed information of tRNA gene sequence


Sequence ID>WENV181405980
Genome IDOGCE01017444
Search identical group
Phylum/Class[OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA
Species
Start position on genome 337
End posion on genome 264
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
accacggcgc
tRNA gene sequence 
AGCGGGGTAGGCCAGCCTGGTAGGCCGCGGGGCTCATAACCCCGAGGTCCCCGGTTCAAA
TCCGGGCCCCGCTAtgg
Downstream region at tRNA end position 
aagaattctt
Secondary structure (Cloverleaf model)
>WENV181405980	fMet	CAT
                   c      Atgg aagaattctt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       C C G G       C C C G G     C
    T       | | | |                 T T
    G       G G C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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