The detailed information of tRNA gene sequence


Sequence ID>WENV181406148
Genome IDOGCG01000007
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 62600
End posion on genome 62692
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaactaag
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCAACAGATTGCTAATCTGTCGTATGGGCCAAATTC
CCATACCAAGGGTTCGAATCCCTTTCTCTCCTCtt
Downstream region at tRNA end position 
tgggactgta
Secondary structure (Cloverleaf model)
>WENV181406148	Ser	GCT
                   g      TCtt tgggactgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTATGGGCCAAATTCCCATACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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