The detailed information of tRNA gene sequence


Sequence ID>WENV181406164
Genome IDOGCG01000007
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 83873
End posion on genome 83786
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatttctaat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCTAAAGCGTAGCATTGGAAATGCTATGAAAACTTATGGTTT
TCCGAGAGTTCGAATCTCTCTCTCTCCTgtc
Downstream region at tRNA end position 
caattatgca
Secondary structure (Cloverleaf model)
>WENV181406164	Ser	GGA
                   t      Tgtc caattatgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TGAAAACTTATGGTTTTCC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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