The detailed information of tRNA gene sequence


Sequence ID>WENV181406592
Genome IDOGCG01000582
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 10127
End posion on genome 10052
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gtacaaaggt
tRNA gene sequence 
GCCGCGGTAGTATAGCCCGGCCCAGTATGCGGGCCTCTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGCGGCACtc
Downstream region at tRNA end position 
tgcgcgggct
Secondary structure (Cloverleaf model)
>WENV181406592	Glu	CTC
                   t      ACtc tgcgcgggct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    C C C A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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